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BRIDGE Lab Documentation
  • BRIDGE Lab Documentation
  • 📘General
    • About Us
    • Onboarding
      • First Steps
      • Research Specialist Training
      • Project Coordinator Training
    • Misc
      • How to do misc things
      • Burning Scans to a Disc
      • Setting Up Meetings in the Conference Room
    • Imaging Glossary
  • 🖇️Admin
    • Ourday
    • Training
    • Regulatory
    • Social Media
    • REDCap
      • Archiving REDCap Projects
  • 🖥️Tech
    • Setting Up Meetings in the Conference Room
    • Effective Troubleshooting
    • Remote Work Resources
    • Arthur
    • Servers
      • Connecting to an External Server
    • Bash 101
      • What is Bash?
      • Bash Examples
      • How to add elements to your bash profile
    • git and Github
  • 🩻Image Acquisition
    • ViSTa
  • 🗃️Data Organization
    • BIDs Data Formatting
    • MRI Data Organization
  • 🖼️Image Analysis
    • Image QC
      • Raw Data QC
        • Diffusion QC
        • T1/T2 QC
        • ViSTa QC
        • Spectroscopy QC
      • PyDesigner QC
    • Project Lifecycle
    • General Concepts
    • Raw Data
    • Preprocessing
      • Denoising UNI MP2RAGE Images
      • PyDesigner
      • ViSTa
    • Native Space Analysis
      • TractSeg
        • TractSeg + Within-Subject Registration
      • Segmentation
        • LST
        • Freesurfer
        • NOMIS
    • Registration
      • DTI-TK
      • TBSS
      • Coordinate Systems
    • Other Pipelines
    • Archiving
  • 📊Data Viz and Stats
    • Plotting in R
  • 📚Imaging Library
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Last updated 8 months ago

Welcome to the documentation collective of the Brain Imaging Diffusion Group (BRIDGE) Lab at MUSC. If you are here, you are likely a BRIDGE member. If not, you can read more about our work here.