LST
The Lesion Segmentation Tool is used to identify and quantify brain lesions using T1 and T2 structural images.
For an automated script to run LST on your BIDS formatted data, see: https://github.com/ryn-thorn/Image_Analysis_Scripts/blob/main/LST.m
It is packaged with the SPM toolbox and called in MATLAB using the script below:
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