Gross White Matter Estimation
This is a quick and dirty experimental pipeline conceived by Andrew Chen, Ryn Thorn, and Hunter Moss for quickly looking at diffusion metric means whole-brain gross white matter. It uses MD and MK thresholding to derive estimated WM.
For an automated script to perform this pipeline on your BIDS formatted and PyDesigner'd data, see: https://github.com/ryn-thorn/Image_Analysis_Scripts/blob/main/gross_wm_thr.sh
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